Discovery of a potent and selective adenylyl cyclase type 8 agonist by docking-based virtual screening

Bioorg Med Chem Lett. 2020 Jan 15;30(2):126823. doi: 10.1016/j.bmcl.2019.126823. Epub 2019 Nov 16.

Abstract

Adenylyl cyclases (ACs), which are responsible for catalyzing the conversion of adenosine triphosphate (ATP) into the second messenger cyclic adenosine monophosphate (cAMP), play a critical role in cell signal transduction. In this study, a combined approach involving docking-based virtual screening, with the combination of homology modeling followed by an in-vitro, and cell-based biological assay have been performed for discovering a class of novel potent and selective isoform adenylyl cyclase type 8 (AC8) agonist. The computer-aided virtual screening was used to identify fourteen virtual cluster compounds as potential hits which were further subjected to rigorous bioassays. A novel hit compound VHC-7 (ethyl 3-(2,4-dichlorobenzyl)-2-oxoindoline-3-carboxylate) was identified as a highly potent selective AC8 agonist with EC50 value of 0.1052 ± 0.038 µM. Remarkably, the molecule herein reported can be explored further to discover greater number of hit compounds with better pharmacokinetic properties as well as to serve as a promising novel hit agonist of AC8 for the treatment of various central nervous system disorders and its associated diseases.

Keywords: Adenylyl cyclases; Biological evaluation; Consensus scoring; Homology modeling; Molecular dynamics simulation; Virtual screening.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenylyl Cyclases / pharmacology
  • Adenylyl Cyclases / therapeutic use*
  • Humans
  • Mass Screening
  • Molecular Docking Simulation / methods*
  • Structure-Activity Relationship

Substances

  • Adenylyl Cyclases
  • adenylyl cyclase 8